dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001750_1|CGC1
Gene ID: MGYG000001750_00003
Location and strand information: 4858 - 7458 (+)
Family: GH3
Protein type: CAZyme
Protein description: Xylan 1,4-beta-xylosidase
Protein isoelectric point: 5.8384
Protein molecular weight: 96195.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001750_1|CGC1
Gene ID: MGYG000001750_00004
Location and strand information: 7537 - 11661 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001750_1|CGC1
Gene ID: MGYG000001750_00005
Location and strand information: 11775 - 13784 (-)
Family: GH67
Protein type: CAZyme
Protein description: Extracellular xylan exo-alpha-(1->2)-glucuronosidase
Protein isoelectric point: 6.3786
Protein molecular weight: 76205.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001750_1|CGC1
Gene ID: MGYG000001750_00006
Location and strand information: 13778 - 14752 (-)
Family: GH43_1|GH43
Protein type: CAZyme
Protein description: Xylosidase/arabinosidase
Protein isoelectric point: 4.7772
Protein molecular weight: 37061.53
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001750_1|CGC1
Gene ID: MGYG000001750_00007
Location and strand information: 14786 - 15922 (-)
Family: GH10
Protein type: CAZyme
Protein description: Endo-1,4-beta-xylanase A
Protein isoelectric point: 6.4188
Protein molecular weight: 42765.03
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001750_1|CGC1
Gene ID: MGYG000001750_00008
Location and strand information: 15944 - 17437 (-)
Family: 2.A.2.3.4
Protein type: TC
Protein description: Inner membrane symporter YicJ

Gene clsuter ID: MGYG000001750_1|CGC1
Gene ID: MGYG000001750_00009
Location and strand information: 17889 - 19289 (+)
Family: CBM13|CBM42|CBM22|GH43_29|CBM2|GH43|CBM6
Protein type: CAZyme
Protein description: Arabinoxylan arabinofuranohydrolase
Protein isoelectric point: 5.9387
Protein molecular weight: 52305.75
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001750_1|CGC1
Gene ID: MGYG000001750_00010
Location and strand information: 19345 - 20484 (+)
Family: CE0|CE1
Protein type: CAZyme
Protein description: Carbohydrate acetyl esterase/feruloyl esterase
Protein isoelectric point: 6.5027
Protein molecular weight: 42574.71
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001750_1|CGC1
Gene ID: MGYG000001750_00011
Location and strand information: 20514 - 21389 (+)
Family: CE1
Protein type: CAZyme
Protein description: Endo-1,4-beta-xylanase Z
Protein isoelectric point: 6.6023
Protein molecular weight: 33016.69
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001750_1|CGC1
Gene ID: MGYG000001750_00012
Location and strand information: 21642 - 24065 (-)
Family: GH146
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3845
Protein molecular weight: 91848.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001750_1|CGC1
Gene ID: MGYG000001750_00013
Location and strand information: 24075 - 24374 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001750_1|CGC1
Gene ID: MGYG000001750_00014
Location and strand information: 24341 - 24919 (-)
Family: CBM22|GH30_8
Protein type: CAZyme
Protein description: Glucuronoxylanase XynC
Protein isoelectric point: 4.5269
Protein molecular weight: 22480.4
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001750_1|CGC1
Gene ID: MGYG000001750_00015
Location and strand information: 25330 - 26952 (-)
Family: GH43|GH43_10
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.3745
Protein molecular weight: 61072.1
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001750_1|CGC1
Gene ID: MGYG000001750_00016
Location and strand information: 27255 - 28955 (+)
Family: GH43_12|GH43
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43A
Protein isoelectric point: 8.237
Protein molecular weight: 62987.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001750_1|CGC1
Gene ID: MGYG000001750_00017
Location and strand information: 29227 - 29784 (-)
Family: GH10|CBM4
Protein type: CAZyme
Protein description: Endo-beta-1,4-xylanase Xyn10C
Protein isoelectric point: 4.4711
Protein molecular weight: 20885.62
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001750_1|CGC1
Gene ID: MGYG000001750_00018
Location and strand information: 29756 - 30367 (-)
Family: 1.B.14.6.2
Protein type: TC
Protein description: TonB-dependent receptor SusC

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is arabinoxylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001750_00003	Xylan 1,4-beta-xylosidase	CAZyme	4858	7458	+	GH3
MGYG000001750_00004	Sensor histidine kinase RcsC	TF	7537	11661	+	HTH_AraC+HTH_AraC
MGYG000001750_00005	Extracellular xylan exo-alpha-(1->2)-glucuronosidase	CAZyme	11775	13784	-	GH67
MGYG000001750_00006	Xylosidase/arabinosidase	CAZyme	13778	14752	-	GH43_1\| GH43
MGYG000001750_00007	Endo-1,4-beta-xylanase A	CAZyme	14786	15922	-	GH10
MGYG000001750_00008	Inner membrane symporter YicJ	TC	15944	17437	-	2.A.2.3.4
MGYG000001750_00009	Arabinoxylan arabinofuranohydrolase	CAZyme	17889	19289	+	CBM13\| CBM42\| CBM22\| GH43_29\| CBM2\| GH43\| CBM6
MGYG000001750_00010	Carbohydrate acetyl esterase/feruloyl esterase	CAZyme	19345	20484	+	CE0\| CE1
MGYG000001750_00011	Endo-1,4-beta-xylanase Z	CAZyme	20514	21389	+	CE1
MGYG000001750_00012	hypothetical protein	CAZyme	21642	24065	-	GH146
MGYG000001750_00013	hypothetical protein	null	24075	24374	-	Glyco_hydro_30C
MGYG000001750_00014	Glucuronoxylanase XynC	CAZyme	24341	24919	-	CBM22\| GH30_8
MGYG000001750_00015	hypothetical protein	CAZyme	25330	26952	-	GH43\| GH43_10
MGYG000001750_00016	Non-reducing end alpha-L-arabinofuranosidase BoGH43A	CAZyme	27255	28955	+	GH43_12\| GH43
MGYG000001750_00017	Endo-beta-1,4-xylanase Xyn10C	CAZyme	29227	29784	-	GH10\| CBM4
MGYG000001750_00018	TonB-dependent receptor SusC	TC	29756	30367	-	1.B.14.6.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001750_00003	GH3_e159\|3.2.1.55\|3.2.1.37\|3.2.1.21\|3.2.1.-	xylan\|beta-glucan\|arabinan
MGYG000001750_00005	GH67_e0\|3.2.1.139\|3.2.1.131\|3.2.1.-	xylan
MGYG000001750_00006	GH43_e85\|3.2.1.55\|3.2.1.37	xylan
MGYG000001750_00007	GH10_e61
MGYG000001750_00009	GH43_e167\|CBM6_e17\|CBM42_e14\|CBM2_e92\|CBM22_e12\|CBM13_e49\|3.2.1.8\|3.2.1.55\|3.2.1.37	xylan
MGYG000001750_00010	CE1_e15
MGYG000001750_00011	CE1_e69
MGYG000001750_00012	GH146_e10\|3.2.1.185	arabinan
MGYG000001750_00014	CBM22_e16\|3.2.1.8
MGYG000001750_00015	GH43_e221\|3.2.1.55	xylan
MGYG000001750_00016	GH43_e65\|3.2.1.8\|3.2.1.55	xylan
MGYG000001750_00017	GH10_e9\|CBM4_e10\|3.2.1.8	xylan